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star-fwd-software-l - Re: [Star-fwd-software-l] Issue with loading modules for forward tracking

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  • From: Gavin Wilks <gwilks3 AT uic.edu>
  • To: "Brandenburg, James" <jbrandenburg AT bnl.gov>
  • Cc: "star-fwd-software-l AT lists.bnl.gov" <star-fwd-software-l AT lists.bnl.gov>, Te-Chuan Huang <tchuang.phys AT gmail.com>
  • Subject: Re: [Star-fwd-software-l] Issue with loading modules for forward tracking
  • Date: Wed, 21 Sep 2022 09:18:22 -0500

Hello Daniel,

Dmitri Smirnov helped me solve this issue on Mattermost. I am now able to run tracking. 

One of the issues was I was not clearing my loaded modules and this was causing issues. Another issue was that we needed to load another module to properly run root4star.

The environment script was changed to the following:
setup 64b
starver dev
module use /cvmfs/star.sdcc.bnl.gov/star-spack/spack/share/spack/modules/linux-rhel7-x86_64/
module load star-env-0.2.0-root-5.34.38
module load zlib-1.2.12

Which can be found at /star/u/gwilks3/fst/ForwardTracking/star-sw-1/updatedenv.sh

Best,
Gavin 

On Sep 21, 2022, at 02:13, Brandenburg, James <jbrandenburg AT bnl.gov> wrote:

Hi Gavin,

Are you still hitting this issue?
If so I'll take a look at it today.
Did you update your code from fwd-tracking branch or it is a version that worked before?

-Daniel

On Sep 19, 2022, at 10:47 PM, Gavin Wilks <gwilks3 AT uic.edu> wrote:

Hello,

Thank you akio for updating the list on that change to the star-env module. 

I am running into a different issue, which has stumped me today. I am trying to use some other genfit utilities for alignment purposes, specifically genfit::MaterialProperties. All of my code compiles, but when I try to run the forward tracking software I receive an error informing me that the symbol corresponding to this class is undefined. I am not sure how to fix this issue as this class should be linked through loading the genfit module. I did not have this issue prior to the updates to the modules.

Command:
root4star -l -b -q ./StRoot/StFwdTrackMaker/macro/sim/fwd_tracking.C\(10,\"sim.fzd\",\"./StRoot/StFwdTrackMaker/macro/sim/full_track.xml\”\)

The error is:
dlopen error: /direct/star+u/gwilks3/fst/ForwardTracking/star-sw-1/.sl73_x8664_gcc485/lib/libStFwdTrackMaker.so: undefined symbol: _ZTVN6genfit18MaterialPropertiesE
Load Error: Failed to load Dynamic link library /direct/star+u/gwilks3/fst/ForwardTracking/star-sw-1/.sl73_x8664_gcc485/lib/libStFwdTrackMaker.so
BFC:FATAL - problem with loading of libStFwdTrackMaker
BFC:FATAL - fwdTrack is switched off  !!!!
root4star: .sl73_x8664_gcc485/obj/StRoot/StBFChain/StBFChain.cxx:177: virtual Int_t StBFChain::Load(): Assertion `libraryload!=kStErr' failed.
Abort

If anyone has any insight, it would be greatly appreciated.

Best Regards and Thank you,
Gavin

On Sep 16, 2022, at 13:48, Akio Ogawa <akio AT bnl.gov> wrote:

Hello

Following 4 lines without kitrack/genfit module which is now
loaded by star-env:

setup 64b
starver dev
module use /cvmfs/star.sdcc.bnl.gov/star-spack/spack/share/spack/modules/linux-rhel7-x86_64/
module load star-env-0.2.0-root-5.34.38

or

/star/u/akio/fcstrk5/star-sw-1/env.sh

should work.

OGAWA, akio     Email : akio AT bnl.gov
BrookHaven National Lab. Physics Dep. 510A 2-235
Upton, NY, 11973-5000        Tel. 631-344-5293

On Sat, 17 Sep 2022, Te-Chuan Huang wrote:

Hi Gavin,
It seems to me that the star-spack repository on cvmfs was updated on Sep. 13 and some of the module name has
been changed.
I think you can try to modify the relevant lines in env.sh as following:
module load star-env-0.2.0-root-5.34.38
module load kitrack-01-10-star-1-root-5.34.38
module load genfit-b496504a-root-5.34.38
I didn’t try to run the codes but I guess it should work.
Cheers,
Te-Chuan

     On Sep 17, 2022, at 12:26 AM, Gavin Wilks <gwilks3 AT uic.edu> wrote:
Dear All, 
I am currently unable to load the required modules for the forward tracking using the env.sh command.
Has anyone else run into this issue lately?
Command: 
source StRoot/StFwdTrackMaker/macro/env.sh
Output:
ModuleCmd_Load.c(213):ERROR:105: Unable to locate a modulefile for 'star-env-root-5.34.38'
ModuleCmd_Load.c(213):ERROR:105: Unable to locate a modulefile for 'kitrack-root-5.34.38'
ModuleCmd_Load.c(213):ERROR:105: Unable to locate a modulefile for 'genfit-root-5.34.38'
Best Regards,
Gavin
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