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sphenix-run-l - [Sphenix-run-l] our backup system went full - please don't dump raw data or root output files to the home disk (INTT take note!)

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Subject: Commissioning and running of sPHENIX

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  • From: Martin Purschke <purschke AT bnl.gov>
  • To: sphenix-run-l AT lists.bnl.gov
  • Subject: [Sphenix-run-l] our backup system went full - please don't dump raw data or root output files to the home disk (INTT take note!)
  • Date: Mon, 19 Jun 2023 08:45:46 -0400

All,

we make daily backups of the entire /home disk. The home disk is for source files, built code, etc.

The backup system was designed to last through the entire envisioned lifetime of sPHENIX - we would have had a daily snapshot of the entire thing for close to 4 years back. Not so.

We stood at about 11% full 2 weeks ago. Since then, several detectors, notably the INTT (but it's not the only one), has taken to dumping their root output files to the home disk.

Here are some top-sized areas:

42G /home/phnxrc/INTT/data
61G /home/phnxrc/INTT/commissioning_5_23
72G /home/phnxrc/INTT/hachiya
130G /home/phnxrc/INTT/commissioning_6_2
378G /home/phnxrc/INTT/commissioning
484G /home/phnxrc/INTT/commissioning_6_4
577G /home/phnxrc/INTT/commissioning_6_6


(there are more than 8000 root output files in those areas alone).

Also note that the most toxic thing are large files that change daily, which those do since they get re-processed, apparently. Unchanged files don't take up extra space on next day's backup. I also notice log files close to 3G in size that are changing every day.

*PLEASE DON'T PUT OUTPUT FILES ON THE HOME DISK.*

To begin with, you shoot yourself in the foot since you are putting the files on a relatively slow file system compared to the /bbox area, but you also ruin it for all of us. (You also cannot easily move the files to the SDCC.)

We paid more than a million $ for the /bbox file system to hold such files. We have the /bbox/commissioning area where you are free to make directories as you please. Please move those files to, say,
/bbox/commissioning/INTT/hit_files

(and please think!!! If you move them DON'T use a intt* machine to do that! You drag the files through the network twice, from the /home server to the machine to a bufferbox. Log in to a bufferbox to do that, and ask if you are unsure!)

I don't want to start policing disk usage, but this has to stop, and it has to stop now. Those files have to go (also from the backup, I don't quite know yet how I can do that). We arrived at the point sometime last week where the daily backup takes more than 24 hours.

Bottom line, no backups for a few days.

Please people, be considerate - we rely on those backups. I cannot count the times when we retrieved an inadvertently deleted or modified file from it.

Martin


--
Martin L. Purschke, Ph.D. ; purschke AT bnl.gov
; http://www.phenix.bnl.gov/~purschke
;
Brookhaven National Laboratory ; phone: +1-631-344-5244
Physics Department Bldg 510 C ; fax: +1-631-344-3253
Upton, NY 11973-5000 ; skype: mpurschke
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